Laboratory for Functional Genomics
Department of Biology
Texas A&M University
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LFG BLAST Search

Motif  Discovery Resources

Magnaporthe DB

MGTFs

Motif finding resources
The resources below are ab initio search tools used to discern potential transcription factor binding sites from the promoters of groups of co-regulated genes.  Graphic interfaces for these tools were produced using the Pise software environment by Catherine Letondal at the Pasteur Institute.

AlignACE
BioProspector
GC-Count Calculates the GC content of a DNA sequence. Required input for some tools.
Gibbs Motif Sampler
WeederEater
Motif Locator
CTAMS
CLOVER
Clustal/Phylip Suite
MEME Under Construction--check back soon!
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